Gene behind Similipal Tiger Reserve's melanistic tigers decoded

Since then it was a mystery and it led 18 researchers to conduct a broad study to decode the pseudomelanism in tigers.
A melanistic tiger in Nandankanan zoo | Rajesh Kumar Mohapatra
A melanistic tiger in Nandankanan zoo | Rajesh Kumar Mohapatra

BHUBANESWAR: The rare melanistic tigers of Similipal Tiger Reserve (STR) have been decoded. A group of researchers has discovered the genetic mutation that caused pseudomelanism in a limited number of tigers found only in the fourth largest tiger habitat in the country.

The researchers, including scientists from the National Centre for Biological Sciences (NCBS), Bengaluru, headed by senior molecular ecologist Uma Ramakrishnan have found that a single mutation in the gene Transmembrane Aminopeptidase Q (Taqpep) caused the tigers develop black stripes and a distinct pattern.

The rare tigers were first officially discovered in STR in 2007. Since then it was a mystery and it led 18 researchers to conduct a broad study to decode the pseudomelanism in tigers. They had collected saliva and hair samples from the melanistic tigers which are born in captivity at Nandankanan Zoological park and faecal samples of tigers from STR.

“Of the 12 samples collected from STR, around 60 per cent (pc) were found to be of melanistic tigers which are most endangered as they exist in small populations; many of which are isolated too. Evolution in such populations is largely governed by genetic drift. Approximately 37 pc of tigers (Panthera tigris) in the STR are pseudomelanistic, characterised by wide, merged stripes,” said Ramakrishnan.

During the study, the researchers identified a genetic variant that causes a or observable trait change (called phenotype) in tigers. Genome sequencing and extensive genotyping of noninvasive samples across tiger range revealed unique spatial presence of this gene form mutation in the tiger reserve.

“We had studied 490 samples from several other tiger reserves across the country and found that the melanistic tigers are located only in Similipal,” she informed.According to the researchers, the genetic analysis of other tiger populations in the country and computer simulations suggested that the Similipal black tigers may have arisen from a very small founding population of tigers and are inbred. Nandankanan Zoo has three such tigers as one tigress Rani was brought from Similipal several years back.  

Pseudomelanistic tigers are also present in two other zoos - Arignar Anna Zoological Park, Chennai and Bhagwan Birsa Biological Park, Ranchi, where they were born in captivity. The occurrence of anomalous phenotypes in natural populations is associated with a loss of genetic diversity in bottlenecked or inbred populations.The study has been published in the recent issue of the Proceedings of the National Academy of Sciences (PNAS), a US-based journal. 

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