The former Union minister's remarks at an event in Delhi on Tuesday are being seen as a criticism of the party leadership at both the central and state levels.
A bench comprising Chief Justice of India Surya Kant and Justice Joymalya Bagchi directed the party to approach the Patna High Court with its grievances.
Less than 200 trans genders voters participating in an election that concluded with a historic voter turnout of 67.13% in Bihar since 1951, points to critical examination.
Chief Electoral Officer Vinod Singh Gunjiyal said that figures from about 2,000 polling booths were still awaited, and the final percentage could rise further.